Stem-loop oni-mir-2184

Accession

MI0035047

Description

Oreochromis niloticus oni-mir-2184 precursor miRNA

Sequence

406117 reads, 412.0 reads per million, 105 experiments

AACAGUAAGAGUUUAUGUGCUGuucuuuaacucucaGCACAUGAGCUUUUACGGUGC
.((.((((((((((((((((((............)))))))))))))))))).))..

Structure

-A  A                  uucuu 
  AC GUAAGAGUUUAUGUGCUG     u
  || ||||||||||||||||||      
  UG CAUUUUCGAGUACACGac     a
CG  G                  ucuca 

Annotation confidence High

Genome context

GL831384.1: 416520-416576 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from oni-mir-2184

Mature oni-miR-2184-5p

• Accession: MIMAT0043042
• Description: Oreochromis niloticus oni-miR-2184-5p mature miRNA
• Sequence: 1 - AACAGUAAGAGUUUAUGUGCUG - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-2184-3p

• Accession: MIMAT0059524
• Description: Oreochromis niloticus oni-miR-2184-3p mature miRNA
• Sequence: 37 - GCACAUGAGCUUUUACGGUGC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774