Stem-loop oni-mir-10547b

Accession

MI0035052

Description

Oreochromis niloticus oni-mir-10547b precursor miRNA

Sequence

6795 reads, 8.0 reads per million, 105 experiments

UUGACUUUCUGCCCCGACGGCgugucuuuguuugUGCCAUCGGGUGAGAAAGACacaau
.((.((((((..(((((.((((((........)))))).)))))..)))))).))....

Structure

---U  A      GC     C      ucu 
    UG CUUUCU  CCCGA GGCgug   u
    || ||||||  ||||| ||||||    
    aC GAAAGA  GGGCU CCGUgu   u
uaac  A      GU     A      uug 

Annotation confidence Medium

Genome context

GL831540.1: 361131-361189 [+]

Mature oni-miR-10547b-5p

• Accession: MIMAT0043046
• Description: Oreochromis niloticus oni-miR-10547b-5p mature miRNA
• Sequence: 1 - UUGACUUUCUGCCCCGACGGC - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10547b-3p

• Accession: MIMAT0059526
• Description: Oreochromis niloticus oni-miR-10547b-3p mature miRNA
• Sequence: 35 - UGCCAUCGGGUGAGAAAGAC - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774