Stem-loop oni-mir-10552

Accession

MI0035055

Description

Oreochromis niloticus oni-mir-10552 precursor miRNA

Sequence

24019 reads, 30.0 reads per million, 103 experiments

UCUUCCAUGCACUUUGAUGACUuauuuuuucaaacugUCAUCAAACUGCAUGGAGGUGGU
.((((((((((.(((((((((...............))))))))).))))))))))....

Structure

---U          C         Uuauuu 
    CUUCCAUGCA UUUGAUGAC      u
    |||||||||| |||||||||      u
    GGAGGUACGU AAACUACUg      u
UGGU          C         ucaaac 

Annotation confidence High

Genome context

CM001451.1: 6090908-6090967 [+]

Mature oni-miR-10552-5p

• Accession: MIMAT0043049
• Description: Oreochromis niloticus oni-miR-10552-5p mature miRNA
• Sequence: 1 - UCUUCCAUGCACUUUGAUGACU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10552-3p

• Accession: MIMAT0059529
• Description: Oreochromis niloticus oni-miR-10552-3p mature miRNA
• Sequence: 38 - UCAUCAAACUGCAUGGAGGUGGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774