Stem-loop oni-mir-10584

Accession

MI0035059

Description

Oreochromis niloticus oni-mir-10584 precursor miRNA

Sequence

2880 reads, 148.0 reads per million, 20 experiments

AGUGGGUUUGGUUCACUUUGAugugcuguuugcaacAAAGUGUUAUCCCCAUCCACUU
(((((((..((..(((((((...(((.....))).)))))))....))..))))))).

Structure

-       UU  --UU       Aug   u 
 AGUGGGU  GG    CACUUUG   ugc g
 |||||||  ||    |||||||   ||| u
 UCACCUA  CC    GUGAAAc   acg u
U       CC  UAUU       --a   u 

Annotation confidence High

Genome context

GL831444.1: 638085-638142 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from oni-mir-10584

Mature oni-miR-10584-5p

• Accession: MIMAT0059531
• Description: Oreochromis niloticus oni-miR-10584-5p mature miRNA
• Sequence: 1 - AGUGGGUUUGGUUCACUUUGA - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10584-3p

• Accession: MIMAT0043052
• Description: Oreochromis niloticus oni-miR-10584-3p mature miRNA
• Sequence: 37 - AAAGUGUUAUCCCCAUCCACUU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774