Stem-loop oni-mir-10573d

Accession

MI0035061

Description

Oreochromis niloticus oni-mir-10573d precursor miRNA

Sequence

6695 reads, 12.0 reads per million, 104 experiments

cggcgCUCGAGGACUGGAGUUUGAcacccgugcuuuaggucauuauaugccagggguggggaacUCCAGGCCUCGAGGGCCa
.(((.(((((((.(((((((((..(((((.((...((........))...)).)))))..))))))))).))))))).))).

Structure

c   g       A         GA     g  cuu  ggu 
 ggc CUCGAGG CUGGAGUUU  caccc ug   ua   c
 ||| ||||||| |||||||||  ||||| ||   ||    
 CCG GAGCUCC GACCUcaag  guggg ac   au   a
a   G       G         gg     g  cgu  auu 

Annotation confidence High

Genome context

CM001456.1: 31734554-31734635 [-]

Mature oni-miR-10573d-5p

• Accession: MIMAT0043054
• Description: Oreochromis niloticus oni-miR-10573d-5p mature miRNA
• Sequence: 6 - CUCGAGGACUGGAGUUUGA - 24
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10573d-3p

• Accession: MIMAT0059533
• Description: Oreochromis niloticus oni-miR-10573d-3p mature miRNA
• Sequence: 65 - UCCAGGCCUCGAGGGCC - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774