Stem-loop oni-mir-10589

Accession

MI0035067

Description

Oreochromis niloticus oni-mir-10589 precursor miRNA

Sequence

3463 reads, 5.0 reads per million, 102 experiments

AAACAAAGGUGUGUACUCUCCauguggauagaGAGUACACACCUUUUUUUCC
....((((((((((((((((.((....)).))))))))))))))))......

Structure

--AAAC                C  g 
      AAAGGUGUGUACUCUC au u
      |||||||||||||||| ||  
      UUUCCACACAUGAGag ua g
CCUUUU                a  g 

Annotation confidence High

Genome context

CM001460.1: 6650830-6650881 [-]

Mature oni-miR-10589-5p

• Accession: MIMAT0043060
• Description: Oreochromis niloticus oni-miR-10589-5p mature miRNA
• Sequence: 1 - AAACAAAGGUGUGUACUCUCC - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10589-3p

• Accession: MIMAT0059538
• Description: Oreochromis niloticus oni-miR-10589-3p mature miRNA
• Sequence: 33 - GAGUACACACCUUUUUUUCC - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774