Stem-loop oni-mir-10592

Accession

MI0035077

Description

Oreochromis niloticus oni-mir-10592 precursor miRNA

Sequence

3344 reads, 5.0 reads per million, 79 experiments

UCCGUGGCCCCUGAUGCGGAGCUGaugagcggccacaGCCCGCACCACGGCCGCGGAGGc
(((((((((..((.(((((.((((.((......))))))))))).)).)))))))))...

Structure

---         CC  A     A    a  ag 
   UCCGUGGCC  UG UGCGG GCUG ug  c
   |||||||||  || ||||| |||| ||   
   AGGCGCCGG  AC ACGCC CGac ac  g
cGG         -C  C     -    -  cg 

Annotation confidence High

Genome context

CM001450.1: 32484021-32484080 [-]

Mature oni-miR-10592-5p

• Accession: MIMAT0043066
• Description: Oreochromis niloticus oni-miR-10592-5p mature miRNA
• Sequence: 1 - UCCGUGGCCCCUGAUGCGGAGCUG - 24
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10592-3p

• Accession: MIMAT0059542
• Description: Oreochromis niloticus oni-miR-10592-3p mature miRNA
• Sequence: 38 - GCCCGCACCACGGCCGCGGAGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774