Stem-loop oni-mir-10594a-1

Accession

MI0035079

Description

Oreochromis niloticus oni-mir-10594a-1 precursor miRNA

Sequence

5795 reads, 26.0 reads per million, 86 experiments

UGACCCCACCUCCACAGAGGGAguugugaacaugcacuUCUGUGUCGGUGGGUUUAGG
(((.((((((..((((((((..((.........)).))))))))..)))))).)))..

Structure

--   C      UC        GA  ugu 
  UGA CCCACC  CACAGAGG  gu   g
  ||| ||||||  ||||||||  ||   a
  AUU GGGUGG  GUGUCUuc  cg   a
GG   U      CU        -a  uac 

Annotation confidence Medium

Genome context

AERX01077293.1: 2-59 [-]

Mature oni-miR-10594a-5p

• Accession: MIMAT0043068
• Description: Oreochromis niloticus oni-miR-10594a-5p mature miRNA
• Sequence: 1 - UGACCCCACCUCCACAGAGGGA - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10594a-3p

• Accession: MIMAT0059543
• Description: Oreochromis niloticus oni-miR-10594a-3p mature miRNA
• Sequence: 39 - UCUGUGUCGGUGGGUUUAGG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774