Stem-loop oni-mir-10595

Accession

MI0035081

Description

Oreochromis niloticus oni-mir-10595 precursor miRNA

Sequence

1235 reads, 2.0 reads per million, 54 experiments

AUGAGUUUGGACUGUGCCGAGUcgaucaguuucacaccUCGUUAAAGUCCAGGCUUCUaa
..(((((((((((....((((..((......))....))))....)))))))))))....

Structure

--AU           GUGC    --Uc  uc 
    GAGUUUGGACU    CGAG    ga  a
    |||||||||||    ||||    ||   
    UUCGGACCUGA    GCUc    cu  g
aaUC           AAUU    caca  uu 

Annotation confidence High

Genome context

CM001460.1: 5827946-5828005 [-]

Mature oni-miR-10595-5p

• Accession: MIMAT0043069
• Description: Oreochromis niloticus oni-miR-10595-5p mature miRNA
• Sequence: 1 - AUGAGUUUGGACUGUGCCGAGU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10595-3p

• Accession: MIMAT0059544
• Description: Oreochromis niloticus oni-miR-10595-3p mature miRNA
• Sequence: 39 - UCGUUAAAGUCCAGGCUUCU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774