Stem-loop oni-mir-10600

Accession

MI0035088

Description

Oreochromis niloticus oni-mir-10600 precursor miRNA

Sequence

5242 reads, 10.0 reads per million, 99 experiments

UCUAGGGCAGAGGUGUCGAACauaagguccgggggUUCGACAUCUCUGGUUUAGACU
((((((.((((((((((((((.............)))))))))))))).))))))..

Structure

--      G              auaag 
  UCUAGG CAGAGGUGUCGAAC     g
  |||||| ||||||||||||||     u
  AGAUUU GUCUCUACAGCUUg     c
UC      G              ggggc 

Annotation confidence High

Genome context

CM001457.1: 4614825-4614881 [-]

Mature oni-miR-10600-5p

• Accession: MIMAT0059547
• Description: Oreochromis niloticus oni-miR-10600-5p mature miRNA
• Sequence: 1 - UCUAGGGCAGAGGUGUCGAAC - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10600-3p

• Accession: MIMAT0043076
• Description: Oreochromis niloticus oni-miR-10600-3p mature miRNA
• Sequence: 36 - UUCGACAUCUCUGGUUUAGACU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774