Stem-loop oni-mir-10601

Accession

MI0035089

Description

Oreochromis niloticus oni-mir-10601 precursor miRNA

Sequence

3137 reads, 4.0 reads per million, 103 experiments

AUCCAGACUGACAUCUCCUCACaaagcuucaaguUCGGAGACGUCGUCUGAACGU
...(((((.(((.(((((..((..........))..))))).)))))))).....

Structure

--AUC     U   A     UC  aaag 
     CAGAC GAC UCUCC  AC    c
     ||||| ||| |||||  ||     
     GUCUG CUG AGAGG  ug    u
UGCAA     -   C     CU  aacu 

Annotation confidence High

Genome context

CM001465.1: 10444197-10444251 [+]

Mature oni-miR-10601-5p

• Accession: MIMAT0043077
• Description: Oreochromis niloticus oni-miR-10601-5p mature miRNA
• Sequence: 1 - AUCCAGACUGACAUCUCCUCAC - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10601-3p

• Accession: MIMAT0059548
• Description: Oreochromis niloticus oni-miR-10601-3p mature miRNA
• Sequence: 35 - UCGGAGACGUCGUCUGAACGU - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774