Stem-loop oni-mir-10602

Accession

MI0035090

Description

Oreochromis niloticus oni-mir-10602 precursor miRNA

Sequence

1899 reads, 3.0 reads per million, 104 experiments

UACGUACUCGCGUUCUCGGugaguauguacugGCCGAGAACGCGAGCACGGACU
..(((.((((((((((((((.(((....))).)))))))))))))).)))....

Structure

--UA   A              g   a 
    CGU CUCGCGUUCUCGGu agu u
    ||| |||||||||||||| |||  
    GCA GAGCGCAAGAGCCG uca g
UCAG   C              g   u 

Annotation confidence Medium

Genome context

CM001450.1: 2160947-2161000 [+]

Mature oni-miR-10602-5p

• Accession: MIMAT0059549
• Description: Oreochromis niloticus oni-miR-10602-5p mature miRNA
• Sequence: 1 - UACGUACUCGCGUUCUCGG - 19
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10602-3p

• Accession: MIMAT0043078
• Description: Oreochromis niloticus oni-miR-10602-3p mature miRNA
• Sequence: 33 - GCCGAGAACGCGAGCACGGACU - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774