Stem-loop oni-mir-10605

Accession

MI0035094

Description

Oreochromis niloticus oni-mir-10605 precursor miRNA

Sequence

1636 reads, 3.0 reads per million, 73 experiments

CAAGUGUAACAGGACAACCUGUcuaaagaguaaCAGGUUGUCCUGUUACUCUUU
.(((.(((((((((((((((((..........))))))))))))))))).))).

Structure

C   U                 cuaa 
 AAG GUAACAGGACAACCUGU    a
 ||| |||||||||||||||||     
 UUC CAUUGUCCUGUUGGACa    g
U   U                 auga 

Annotation confidence Medium

Genome context

CM001445.1: 12728857-12728910 [+]

Mature oni-miR-10605-5p

• Accession: MIMAT0043082
• Description: Oreochromis niloticus oni-miR-10605-5p mature miRNA
• Sequence: 1 - CAAGUGUAACAGGACAACCUGU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10605-3p

• Accession: MIMAT0059553
• Description: Oreochromis niloticus oni-miR-10605-3p mature miRNA
• Sequence: 34 - CAGGUUGUCCUGUUACUCUUU - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774