Stem-loop oni-mir-10606

Accession

MI0035096

Description

Oreochromis niloticus oni-mir-10606 precursor miRNA

Sequence

2636 reads, 2.0 reads per million, 98 experiments

UGCAAAUCAGAACGCGGCACGAgcagacaccgcaaaucucuguuuaaucuCGGCCCUGUGAUGUAUUUGCAGc
(((((((((..(((.(((.((((.(((((...........)))))...))))))).)))..)).)))))))..

Structure

--       -  GA   C   A    --c     ccgc 
  UGCAAAU CA  ACG GGC CGAg   agaca    a
  ||||||| ||  ||| ||| ||||   |||||    a
  ACGUUUA GU  UGU CCG GCuc   uuugu    a
cG       U  AG   C   -    uaa     cucu 

Annotation confidence High

Genome context

CM001458.1: 23309675-23309747 [+]

Mature oni-miR-10606-5p

• Accession: MIMAT0043084
• Description: Oreochromis niloticus oni-miR-10606-5p mature miRNA
• Sequence: 1 - UGCAAAUCAGAACGCGGCACGA - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10606-3p

• Accession: MIMAT0059555
• Description: Oreochromis niloticus oni-miR-10606-3p mature miRNA
• Sequence: 51 - CGGCCCUGUGAUGUAUUUGCAG - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774