Stem-loop oni-mir-9b-1

Accession

MI0035097

Description

Oreochromis niloticus oni-mir-9b-1 precursor miRNA

Sequence

2594487 reads, 2563.0 reads per million, 84 experiments

UUUCGGUUAUCUAGCUUUAUGAcgagcagaacacuCAUACAGCUAGAUAACCAAAGAua
....((((((((((((.(((((............))))).)))))))))))).......

Structure

---UUUC            U     cgagc 
       GGUUAUCUAGCU UAUGA     a
       |||||||||||| |||||      
       CCAAUAGAUCGA AUACu     g
auAGAAA            C     cacaa 

Annotation confidence High

Genome context

CM001455.1: 13858579-13858637 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-9b-1

Mature oni-miR-9b-5p

• Accession: MIMAT0043085
• Description: Oreochromis niloticus oni-miR-9b-5p mature miRNA
• Sequence: 1 - UUUCGGUUAUCUAGCUUUAUGA - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-9b-3p

• Accession: MIMAT0059556
• Description: Oreochromis niloticus oni-miR-9b-3p mature miRNA
• Sequence: 36 - CAUACAGCUAGAUAACCAAAGA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774