Stem-loop oni-mir-10607

Accession

MI0035098

Description

Oreochromis niloticus oni-mir-10607 precursor miRNA

Sequence

536 reads, 1.0 reads per million, 77 experiments

UUCCUGUCUGCUCUGAAUGUAGCguggcccacuagcUACAUUCAGACUGCUGGGGUGAa
..(((....((((((((((((((..(.....)..))))))))))))..))..)))....

Structure

--UU   GUCU  --            gu g 
    CCU    GC  UCUGAAUGUAGC  g c
    |||    ||  ||||||||||||  | c
    GGG    CG  AGACUUACAUcg  c c
aAGU   --GU  UC            au a 

Annotation confidence High

Genome context

CM001447.1: 28243077-28243135 [+]

Mature oni-miR-10607-5p

• Accession: MIMAT0043086
• Description: Oreochromis niloticus oni-miR-10607-5p mature miRNA
• Sequence: 1 - UUCCUGUCUGCUCUGAAUGUAGC - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10607-3p

• Accession: MIMAT0059557
• Description: Oreochromis niloticus oni-miR-10607-3p mature miRNA
• Sequence: 37 - UACAUUCAGACUGCUGGGGUGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774