Stem-loop oni-mir-10608a

Accession

MI0035099

Description

Oreochromis niloticus oni-mir-10608a precursor miRNA

Sequence

1724 reads, 3.0 reads per million, 70 experiments

GCAGACCCAGGACAUGCUGGAgagauuauaucucUCGGCUGCCCUGGGAAUGCCU
(((..((((((.((.((((.((((((...)))))))))))).))))))..)))..

Structure

--   GA      A  U    G      u 
  GCA  CCCAGG CA GCUG Agagau  
  |||  |||||| || |||| |||||| a
  CGU  GGGUCC GU CGGC Ucucua  
UC   AA      C  -    -      u 

Annotation confidence Medium

Genome context

GL831204.1: 1514189-1514243 [-]

Mature oni-miR-10608a-5p

• Accession: MIMAT0059558
• Description: Oreochromis niloticus oni-miR-10608a-5p mature miRNA
• Sequence: 1 - GCAGACCCAGGACAUGCUGGA - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10608a-3p

• Accession: MIMAT0043087
• Description: Oreochromis niloticus oni-miR-10608a-3p mature miRNA
• Sequence: 35 - UCGGCUGCCCUGGGAAUGCCU - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774