miRBase entry: oni-mir-10609

Stem-loop oni-mir-10609

Accession

MI0035100

Description

Oreochromis niloticus oni-mir-10609 precursor miRNA

Sequence

ccagccugguguccgguucucgcaacgucucaggaucUGAACCGGACACGACGCUCGCU
..(((.(.(((((((((((......(......).....))))))))))).).)))....

Structure

--cc   c g           ucgcaa gu 
    agc u guguccgguuc      c  c
    ||| | |||||||||||      |   
    UCG A CACAGGCCAAG      g  u
UCGC   C G           -Ucuag ac

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

CM001455.1: 33633692-33633750 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10609

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-10609

Accession	MIMAT0043088
Description	Oreochromis niloticus oni-miR-10609 mature miRNA
Sequence	38 - UGAACCGGACACGACGCUCGCU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774