Stem-loop oni-mir-10611

Accession

MI0035103

Description

Oreochromis niloticus oni-mir-10611 precursor miRNA

Sequence

6451 reads, 11.0 reads per million, 92 experiments

CUAGGUGUAAAGAAGGGUUUGUgucguuuuucacuuuucacUUUCCCUUUUUCACACCUUUCC
..((((((.((((((((...(((...............)))...)))))))).))))))....

Structure

--CU      A        UUU   ucguuu 
    AGGUGU AAGAAGGG   GUg      u
    |||||| ||||||||   |||      u
    UCCACA UUUUUCCC   cac      c
CCUU      C        UUU   uuuuca 

Annotation confidence High

Genome context

CM001459.1: 7273039-7273101 [-]

Mature oni-miR-10611-5p

• Accession: MIMAT0059562
• Description: Oreochromis niloticus oni-miR-10611-5p mature miRNA
• Sequence: 1 - CUAGGUGUAAAGAAGGGUUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10611-3p

• Accession: MIMAT0043091
• Description: Oreochromis niloticus oni-miR-10611-3p mature miRNA
• Sequence: 42 - UUUCCCUUUUUCACACCUUUCC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774