Stem-loop oni-mir-10612

Accession

MI0035104

Description

Oreochromis niloticus oni-mir-10612 precursor miRNA

Sequence

327 reads, 1.0 reads per million, 70 experiments

GAGUUUGAUCUCUGAGCAGGAUggcaaacaucuguagUCCCCAAGAUGUCAAACUAGU
.((((((((.(((.....((((.(((......))).))))...))).))))))))...

Structure

--G        C   GAGCA    g   aa 
   AGUUUGAU UCU     GGAU gca  c
   |||||||| |||     |||| |||   
   UCAAACUG AGA     CCUg ugu  a
UGA        U   --ACC    a   cu 

Annotation confidence High

Genome context

CM001464.1: 11478256-11478313 [-]

Mature oni-miR-10612-5p

• Accession: MIMAT0059563
• Description: Oreochromis niloticus oni-miR-10612-5p mature miRNA
• Sequence: 1 - GAGUUUGAUCUCUGAGCAGGAU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10612-3p

• Accession: MIMAT0043092
• Description: Oreochromis niloticus oni-miR-10612-3p mature miRNA
• Sequence: 38 - UCCCCAAGAUGUCAAACUAGU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774