Stem-loop oni-mir-10613

Accession

MI0035106

Description

Oreochromis niloticus oni-mir-10613 precursor miRNA

Sequence

5309 reads, 4.0 reads per million, 100 experiments

UGUACCUCUGCGUGUGUCAGCCGuuaucagcucuaacaGCACCCCAUGCAGAGGGC
....((((((((((.(...((.((((.......)))).))...)))))))))))..

Structure

UGUA          U UCA  C    uc 
    CCUCUGCGUG G   GC Guua  a
    |||||||||| |   || ||||  g
    GGAGACGUAC C   CG caau  c
--CG          - CCA  a    cu 

Annotation confidence Medium

Genome context

CM001453.1: 10013095-10013150 [+]

Mature oni-miR-10613-5p

• Accession: MIMAT0043093
• Description: Oreochromis niloticus oni-miR-10613-5p mature miRNA
• Sequence: 1 - UGUACCUCUGCGUGUGUCAGCCG - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10613-3p

• Accession: MIMAT0059564
• Description: Oreochromis niloticus oni-miR-10613-3p mature miRNA
• Sequence: 39 - GCACCCCAUGCAGAGGGC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774