miRBase entry: oni-mir-26d

Stem-loop oni-mir-26d

Accession

MI0035107

Description

Oreochromis niloticus oni-mir-26d precursor miRNA

Literature search

3 open access papers mention oni-mir-26d
(5 sentences)

Sequence

gcaaguaaucaagcauaggccaaagcagaugcagaaagCCUAUCCUGGAUUACUUGAACC
.(((((((((.((.((((((....((....)).....)))))).)).)))))))))....

Structure

---g         a  c      -caaa  a 
    caaguaauc ag auaggc     gc g
    ||||||||| || ||||||     ||  
    GUUCAUUAG UC UAUCCg     cg a
CCAA         G  C      aaaga  u

Annotation confidence Not enough data

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Genome context

CM001452.1: 11561754-11561813 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-26d

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-26d

Accession	MIMAT0043094
Description	Oreochromis niloticus oni-miR-26d mature miRNA
Sequence	39 - CCUAUCCUGGAUUACUUGAACC - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774