Stem-loop oni-mir-10615a

Accession

MI0035109

Description

Oreochromis niloticus oni-mir-10615a precursor miRNA

Sequence

274 reads, 1.0 reads per million, 57 experiments

CUGCACAGCGUCCAAGCGUUagugcugcuagcucguuaACGCGUUGACGCCUUGCAGCC
(((((..(((((...(((((((.(((...)))...)))))))...)))))..)))))..

Structure

--     CA     CAA       --u   g 
  CUGCA  GCGUC   GCGUUag   gcu  
  |||||  |||||   |||||||   ||| c
  GACGU  CGCAG   CGCAauu   cga  
CC     UC     UUG       gcu   u 

Annotation confidence Medium

Genome context

CM001458.1: 20007373-20007431 [-]

Mature oni-miR-10615a-5p

• Accession: MIMAT0059567
• Description: Oreochromis niloticus oni-miR-10615a-5p mature miRNA
• Sequence: 1 - CUGCACAGCGUCCAAGCGUU - 20
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10615a-3p

• Accession: MIMAT0043096
• Description: Oreochromis niloticus oni-miR-10615a-3p mature miRNA
• Sequence: 39 - ACGCGUUGACGCCUUGCAGCC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774