Stem-loop oni-mir-10603b

Accession

MI0035112

Description

Oreochromis niloticus oni-mir-10603b precursor miRNA

Sequence

7054 reads, 13.0 reads per million, 106 experiments

uUAUUGUGUGGAUGCCCUAAAgggcuuccacacaauuguuuuccuguuucucuuuauucuuuauuguguggaugcccUCAAGGGCUUCCACACUAUUGA
.....(((((((.(((((..(((((.((((((((((..........................)))))))))).)))))..))))).)))))))......

Structure

-uUAUU       U     AA     u          uguuuuccuguu 
      GUGUGGA GCCCU  Agggc uccacacaau            u
      ||||||| |||||  ||||| ||||||||||             
      CACACCU CGGGA  Ucccg agguguguua            c
AGUUAU       U     AC     u          uuucuuauuucu 

Annotation confidence Medium

Genome context

GL831691.1: 180995-181093 [+]

Mature oni-miR-10603b-5p

• Accession: MIMAT0059570
• Description: Oreochromis niloticus oni-miR-10603b-5p mature miRNA
• Sequence: 2 - UAUUGUGUGGAUGCCCUAAA - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10603b-3p

• Accession: MIMAT0043099
• Description: Oreochromis niloticus oni-miR-10603b-3p mature miRNA
• Sequence: 78 - UCAAGGGCUUCCACACUAUUGA - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774