Stem-loop oni-mir-202

Accession

MI0035113

Description

Oreochromis niloticus oni-mir-202 precursor miRNA

Literature search

4 open access papers mention oni-mir-202
(19 sentences)

Sequence

130033 reads, 1022.0 reads per million, 83 experiments

UUCCUAUGCACAUACUUCUUUgagauuuaacuuuAAAGAGGCAUAAGGCAUGGGAAaau
(((((((((.....((((((((((.......))))))))))......)))))))))...

Structure

---         -ACAUA          au 
   UUCCUAUGC      CUUCUUUgag  u
   |||||||||      ||||||||||  u
   AAGGGUACG      GGAGAAAuuu  a
uaa         GAAUAC          ca 

Annotation confidence Medium

Genome context

GL831407.1: 376457-376515 [+]

Mature oni-miR-202-5p

• Accession: MIMAT0043100
• Description: Oreochromis niloticus oni-miR-202-5p mature miRNA
• Sequence: 1 - UUCCUAUGCACAUACUUCUUU - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-202-3p

• Accession: MIMAT0059571
• Description: Oreochromis niloticus oni-miR-202-3p mature miRNA
• Sequence: 35 - AAAGAGGCAUAAGGCAUGGGAA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774