Stem-loop oni-mir-10617

Accession

MI0035114

Description

Oreochromis niloticus oni-mir-10617 precursor miRNA

Sequence

3978 reads, 7.0 reads per million, 49 experiments

GAUGUCAUGCAUGUCAUUGUGACcuggaaaauggagcccUGUGACAUGUGUUAUAUCUGU
(((((.(((((((((((.((..((........)).))...))))))))))).)))))...

Structure

---     C           --U  GA  ugg 
   GAUGU AUGCAUGUCAU   GU  Cc   a
   ||||| |||||||||||   ||  ||    
   CUAUA UGUGUACAGUG   cg  gg   a
UGU     U           Ucc  -a  uaa 

Annotation confidence High

Genome context

CM001445.1: 818042-818101 [-]

Mature oni-miR-10617-5p

• Accession: MIMAT0059572
• Description: Oreochromis niloticus oni-miR-10617-5p mature miRNA
• Sequence: 1 - GAUGUCAUGCAUGUCAUUGUGAC - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10617-3p

• Accession: MIMAT0043101
• Description: Oreochromis niloticus oni-miR-10617-3p mature miRNA
• Sequence: 40 - UGUGACAUGUGUUAUAUCUGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774