miRBase entry: oni-mir-451b

Stem-loop oni-mir-451b


Accession
MI0035116
Description
Oreochromis niloticus oni-mir-451b precursor miRNA


Sequence

423 reads, 3.0 reads per million, 89 experiments
CCGUAGAACCCUUACCAUUACUaaaacucagUAAUGGUAACGGUUUGACAGCCU
..((.(((((.(((((((((((.......))))))))))).))))).)).....

Structure
---CC  A     C           aa 
     GU GAACC UUACCAUUACU  a
     || ||||| |||||||||||  a
     CA UUUGG AAUGGUAAUga  c
UCCGA  G     C           cu 


Annotation confidence Medium
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Genome context
GL831331.1: 655399-655452 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from oni-mir-451b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oni-miR-451b-5p

Accession MIMAT0043103
Description Oreochromis niloticus oni-miR-451b-5p mature miRNA
Sequence 1 - CCGUAGAACCCUUACCAUUACU - 22
Evidence experimental
Illumina [1]

Mature oni-miR-451b-3p

Accession MIMAT0059574
Description Oreochromis niloticus oni-miR-451b-3p mature miRNA
Sequence 32 - UAAUGGUAACGGUUUGACAGCCU - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774