Stem-loop oni-mir-10620

Accession

MI0035118

Description

Oreochromis niloticus oni-mir-10620 precursor miRNA

Sequence

3436 reads, 10.0 reads per million, 99 experiments

GAAAUAAAGAAUUCUCUCGAAGUGuuacuucuccaauaaucaCUCGAAGAAUUCCUUGUUUUAG
(((((((.(((((((.((((.(((................)))))))))))))).)))))))..

Structure

--       A       C    A   uuacuuc 
  GAAAUAA GAAUUCU UCGA GUG       u
  ||||||| ||||||| |||| |||        
  UUUUGUU CUUAAGA AGCU Cac       c
GA       C       -    -   uaauaac 

Annotation confidence High

Genome context

CM001446.1: 6766489-6766552 [+]

Mature oni-miR-10620-5p

• Accession: MIMAT0043105
• Description: Oreochromis niloticus oni-miR-10620-5p mature miRNA
• Sequence: 1 - GAAAUAAAGAAUUCUCUCGAAGUG - 24
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10620-3p

• Accession: MIMAT0059576
• Description: Oreochromis niloticus oni-miR-10620-3p mature miRNA
• Sequence: 43 - CUCGAAGAAUUCCUUGUUUUAG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774