Stem-loop oni-mir-10622-1

Accession

MI0035121

Description

Oreochromis niloticus oni-mir-10622-1 precursor miRNA

Sequence

1742 reads, 5.0 reads per million, 96 experiments

UGUAGAGUCUGUGUGUGGAGCUucugcaguuuguguugaAGCGUCCACACUCAGCUCUGCAGc
(((((((.(((.((((((((((((.(((.....))).))))).))))))).))))))))))..

Structure

--       U   U       -     u   g 
  UGUAGAG CUG GUGUGGA GCUuc gca u
  ||||||| ||| ||||||| ||||| ||| u
  ACGUCUC GAC CACACCU CGAag ugu u
cG       -   U       G     u   g 

Annotation confidence Medium

Genome context

CM001444.1: 2327752-2327814 [-]

Mature oni-miR-10622-5p

• Accession: MIMAT0043108
• Description: Oreochromis niloticus oni-miR-10622-5p mature miRNA
• Sequence: 1 - UGUAGAGUCUGUGUGUGGAGCU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10622-3p

• Accession: MIMAT0059577
• Description: Oreochromis niloticus oni-miR-10622-3p mature miRNA
• Sequence: 40 - AGCGUCCACACUCAGCUCUGCAG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774