Stem-loop oni-mir-10622-3

Accession

MI0035123

Description

Oreochromis niloticus oni-mir-10622-3 precursor miRNA

Sequence

1665 reads, 5.0 reads per million, 95 experiments

UGUAGAGUCUGUGUGUGGAGCUucuguaguuuguguugaAGCGUCCACACUCAGCUCUGCAGc
(((((((.(((.((((((((((((.............))))).))))))).))))))))))..

Structure

--       U   U       -     uguag 
  UGUAGAG CUG GUGUGGA GCUuc     u
  ||||||| ||| ||||||| |||||     u
  ACGUCUC GAC CACACCU CGAag     u
cG       -   U       G     uugug 

Annotation confidence Medium

Genome context

CM001453.1: 10108301-10108363 [+]

Mature oni-miR-10622-5p

• Accession: MIMAT0043108
• Description: Oreochromis niloticus oni-miR-10622-5p mature miRNA
• Sequence: 1 - UGUAGAGUCUGUGUGUGGAGCU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10622-3p

• Accession: MIMAT0059577
• Description: Oreochromis niloticus oni-miR-10622-3p mature miRNA
• Sequence: 40 - AGCGUCCACACUCAGCUCUGCAG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774