Stem-loop oni-mir-10623

Accession

MI0035124

Description

Oreochromis niloticus oni-mir-10623 precursor miRNA

Sequence

456 reads, 2.0 reads per million, 56 experiments

AUUGGCCUGUGGAAAAAAAUGUAguaagaaacacuaCAUUUUUUCAGUAGGCCGAUUU
(((((((((..(((((((.((((((.......)))))))))))))..)))))))))..

Structure

--         UG       A      aa 
  AUUGGCCUG  GAAAAAA UGUAgu  g
  |||||||||  ||||||| ||||||  a
  UAGCCGGAU  CUUUUUU ACauca  a
UU         GA       -      ca 

Annotation confidence High

Genome context

CM001454.1: 11649553-11649610 [-]

Mature oni-miR-10623-5p

• Accession: MIMAT0043109
• Description: Oreochromis niloticus oni-miR-10623-5p mature miRNA
• Sequence: 1 - AUUGGCCUGUGGAAAAAAAUGUA - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10623-3p

• Accession: MIMAT0059578
• Description: Oreochromis niloticus oni-miR-10623-3p mature miRNA
• Sequence: 37 - CAUUUUUUCAGUAGGCCGAUUU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774