Stem-loop oni-mir-10624

Accession

MI0035127

Description

Oreochromis niloticus oni-mir-10624 precursor miRNA

Sequence

4802 reads, 4.0 reads per million, 88 experiments

UGCCCAGUCUGCAGAGUAGGUGcucuuugcuguucucacgCCCGCUCUGUUCUGUCUGUGCAU
(((.(((.(.(((((((.((((................)))).)))))))...).))).))).

Structure

-   C   U --U       A    cucuuug 
 UGC CAG C   GCAGAGU GGUG       c
 ||| ||| |   ||||||| ||||        
 ACG GUC G   UGUCUCG CCgc       u
U   U   U UCU       C    acucuug 

Annotation confidence High

Genome context

GL831390.1: 358706-358768 [+]

Mature oni-miR-10624-5p

• Accession: MIMAT0043110
• Description: Oreochromis niloticus oni-miR-10624-5p mature miRNA
• Sequence: 1 - UGCCCAGUCUGCAGAGUAGGUG - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10624-3p

• Accession: MIMAT0059579
• Description: Oreochromis niloticus oni-miR-10624-3p mature miRNA
• Sequence: 41 - CCCGCUCUGUUCUGUCUGUGCAU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774