Stem-loop oni-mir-10628

Accession

MI0035133

Description

Oreochromis niloticus oni-mir-10628 precursor miRNA

Sequence

503 reads, 1.0 reads per million, 69 experiments

UCCAGCAACCACUCACAUACcagcugacgUCGGUGGGUGUAGUUGUUGGAGG
((((((((((((((((..((........))..)))))))..)))))))))..

Structure

--         --       AU  cag 
  UCCAGCAAC  CACUCAC  AC   c
  |||||||||  |||||||  ||    
  AGGUUGUUG  GUGGGUG  Ug   u
GG         AU       GC  cag 

Annotation confidence High

Genome context

CM001460.1: 14478899-14478950 [+]

Mature oni-miR-10628-5p

• Accession: MIMAT0059582
• Description: Oreochromis niloticus oni-miR-10628-5p mature miRNA
• Sequence: 1 - UCCAGCAACCACUCACAUAC - 20
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10628-3p

• Accession: MIMAT0043115
• Description: Oreochromis niloticus oni-miR-10628-3p mature miRNA
• Sequence: 30 - UCGGUGGGUGUAGUUGUUGGAGG - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774