Stem-loop oni-mir-9b-5

Accession

MI0035137

Description

Oreochromis niloticus oni-mir-9b-5 precursor miRNA

Sequence

2595559 reads, 2564.0 reads per million, 84 experiments

UUUCGGUUAUCUAGCUUUAUGAugcaugauuaucacuCAUACAGCUAGAUAACCAAAGA
....((((((((((((.(((((((.((....)))).))))).)))))))))))).....

Structure

-UUUC            U     -  c  g 
     GGUUAUCUAGCU UAUGA ug au a
     |||||||||||| ||||| || ||  
     CCAAUAGAUCGA AUACu ac ua u
AGAAA            C     c  -  u 

Annotation confidence High

Genome context

CM001444.1: 13557586-13557644 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-9b-5

Mature oni-miR-9b-5p

• Accession: MIMAT0043085
• Description: Oreochromis niloticus oni-miR-9b-5p mature miRNA
• Sequence: 1 - UUUCGGUUAUCUAGCUUUAUGA - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-9b-3p

• Accession: MIMAT0059556
• Description: Oreochromis niloticus oni-miR-9b-3p mature miRNA
• Sequence: 38 - CAUACAGCUAGAUAACCAAAGA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774