Stem-loop oni-mir-10638

Accession

MI0035149

Description

Oreochromis niloticus oni-mir-10638 precursor miRNA

Sequence

393 reads, 1.0 reads per million, 68 experiments

CAUAUGUGCUCUGCAGCUGACUucuaaauaucccagCAGCUGCACUGCAUGCGUGGCU
(((.(((((..((((((((.((............))))))))))..))))).)))...

Structure

---   A     UC        A  ucuaa 
   CAU UGUGC  UGCAGCUG CU     a
   ||| |||||  |||||||| ||      
   GUG GUACG  ACGUCGAC ga     u
UCG   C     UC        -  cccua 

Annotation confidence High

Genome context

CM001450.1: 15619581-15619638 [-]

Mature oni-miR-10638-5p

• Accession: MIMAT0043127
• Description: Oreochromis niloticus oni-miR-10638-5p mature miRNA
• Sequence: 1 - CAUAUGUGCUCUGCAGCUGACU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10638-3p

• Accession: MIMAT0059590
• Description: Oreochromis niloticus oni-miR-10638-3p mature miRNA
• Sequence: 37 - CAGCUGCACUGCAUGCGUGGCU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774