Stem-loop oni-mir-10639

Accession

MI0035150

Description

Oreochromis niloticus oni-mir-10639 precursor miRNA

Sequence

577 reads, 1.0 reads per million, 55 experiments

UUGCCAUGAUAGCUUUAGACAGUUgcagcaaguuugucagcUGCGAGCUCUUUCAUGGUGUUA
..(((((((.(((((..(.(((((((((.....))).))))))))))))...)))))))....

Structure

--UU       --U     UA A      -   c 
    GCCAUGA   AGCUU  G CAGUUg cag a
    |||||||   |||||  | |||||| ||| a
    UGGUACU   UCGAG  C GUcgac guu g
AUUG       UUC     -- -      u   u 

Annotation confidence High

Genome context

GL831486.1: 199684-199746 [+]

Mature oni-miR-10639-5p

• Accession: MIMAT0043128
• Description: Oreochromis niloticus oni-miR-10639-5p mature miRNA
• Sequence: 1 - UUGCCAUGAUAGCUUUAGACAGUU - 24
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10639-3p

• Accession: MIMAT0059591
• Description: Oreochromis niloticus oni-miR-10639-3p mature miRNA
• Sequence: 42 - UGCGAGCUCUUUCAUGGUGUUA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774