Stem-loop oni-mir-10644

Accession

MI0035156

Description

Oreochromis niloticus oni-mir-10644 precursor miRNA

Sequence

1786 reads, 2.0 reads per million, 88 experiments

UGGCAUUAGUGCUUGAGCAGCUgucauuuacaggCUGUUCAGCCUCUGGUGUCUGU
.((((((((.(((.((((((((((.....))).))))))))))..))))))))...

Structure

--U        -U   U       -   c 
   GGCAUUAG  GCU GAGCAGC Ugu a
   ||||||||  ||| ||||||| ||| u
   CUGUGGUC  CGA CUUGUCg aca u
UGU        UC   -       g   u 

Annotation confidence High

Genome context

CM001465.1: 1706052-1706107 [-]

Mature oni-miR-10644-5p

• Accession: MIMAT0043134
• Description: Oreochromis niloticus oni-miR-10644-5p mature miRNA
• Sequence: 1 - UGGCAUUAGUGCUUGAGCAGCU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10644-3p

• Accession: MIMAT0059594
• Description: Oreochromis niloticus oni-miR-10644-3p mature miRNA
• Sequence: 35 - CUGUUCAGCCUCUGGUGUCUGU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774