Stem-loop oni-mir-10645

Accession

MI0035157

Description

Oreochromis niloticus oni-mir-10645 precursor miRNA

Sequence

2206 reads, 2.0 reads per million, 77 experiments

CCCAACUGCAGGGCUGCCAUGGUaaauuuuuccuGUGAGCAGUUCAUCAGUUUGGC
((.(((((..((((((((((((.((....)).))))).)))))))..))))).)).

Structure

-  C     CA       -     U  a 
 CC AACUG  GGGCUGC CAUGG aa u
 || |||||  ||||||| ||||| ||  
 GG UUGAC  CUUGACG GUGuc uu u
C  U     UA       A     c  u 

Annotation confidence High

Genome context

CM001459.1: 32806844-32806899 [+]

Mature oni-miR-10645-5p

• Accession: MIMAT0059595
• Description: Oreochromis niloticus oni-miR-10645-5p mature miRNA
• Sequence: 1 - CCCAACUGCAGGGCUGCCAUGGU - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10645-3p

• Accession: MIMAT0043135
• Description: Oreochromis niloticus oni-miR-10645-3p mature miRNA
• Sequence: 35 - GUGAGCAGUUCAUCAGUUUGGC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774