Stem-loop oni-mir-10646b

Accession

MI0035160

Description

Oreochromis niloticus oni-mir-10646b precursor miRNA

Sequence

255 reads, 4.0 reads per million, 14 experiments

AGAGCUCCUCAGAUCUACUAGCUgacuucuaugagcguguUCAGAGGUCUGGGGAGUCUgc
(((.((((((((((((((..(((.(......).)))..))....)))))))))))))))..

Structure

--   G            ----  UA   g cu 
  AGA CUCCUCAGAUCU    AC  GCU a  u
  ||| ||||||||||||    ||  ||| |   
  UCU GAGGGGUCUGGA    ug  cga u  c
cg   -            GACU  ug   g au 

Annotation confidence High

Genome context

GL831520.1: 227103-227163 [-]

Mature oni-miR-10646b-5p

• Accession: MIMAT0043138
• Description: Oreochromis niloticus oni-miR-10646b-5p mature miRNA
• Sequence: 1 - AGAGCUCCUCAGAUCUACUAGCU - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10646b-3p

• Accession: MIMAT0059596
• Description: Oreochromis niloticus oni-miR-10646b-3p mature miRNA
• Sequence: 41 - UCAGAGGUCUGGGGAGUCU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774