Stem-loop oni-mir-10649

Accession

MI0035162

Description

Oreochromis niloticus oni-mir-10649 precursor miRNA

Sequence

144 reads, 7.0 reads per million, 17 experiments

UGUUCGUCUCCUCCUGAAGGcccgcaacacuacUUUUAGGUCAGGAGAUGCACACG
(((.((((((((((((((((............))))))))..)))))))).)))..

Structure

--   U        --        cccgc 
  UGU CGUCUCCU  CCUGAAGG     a
  ||| ||||||||  ||||||||      
  ACA GUAGAGGA  GGAUUUUc     a
GC   C        CU        aucac 

Annotation confidence High

Genome context

GL831780.1: 46184-46239 [-]

Mature oni-miR-10649-5p

• Accession: MIMAT0059597
• Description: Oreochromis niloticus oni-miR-10649-5p mature miRNA
• Sequence: 1 - UGUUCGUCUCCUCCUGAAGG - 20
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10649-3p

• Accession: MIMAT0043140
• Description: Oreochromis niloticus oni-miR-10649-3p mature miRNA
• Sequence: 34 - UUUUAGGUCAGGAGAUGCACACG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774