Stem-loop oni-mir-10651

Accession

MI0035165

Description

Oreochromis niloticus oni-mir-10651 precursor miRNA

Sequence

472 reads, 1.0 reads per million, 78 experiments

UUAAAAACAGGCCCUGGUGACAcaggagcugcggugcagcggugUGAGCAGGGCUGUGUUUUUGAGC
((((((((((((((((.(.((((....(((((...))))).)))).).))))))).)))))))))..

Structure

--         -       G G    agga     g 
  UUAAAAACA GGCCCUG U ACAc    gcugc  
  ||||||||| ||||||| | ||||    ||||| g
  AGUUUUUGU UCGGGAC A Ugug    cgacg  
CG         G       G G    ---g     u 

Annotation confidence High

Genome context

GL831288.1: 173517-173583 [+]

Mature oni-miR-10651-5p

• Accession: MIMAT0059599
• Description: Oreochromis niloticus oni-miR-10651-5p mature miRNA
• Sequence: 1 - UUAAAAACAGGCCCUGGUGACA - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10651-3p

• Accession: MIMAT0043143
• Description: Oreochromis niloticus oni-miR-10651-3p mature miRNA
• Sequence: 45 - UGAGCAGGGCUGUGUUUUUGAGC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774