Stem-loop oni-mir-10615b

Accession

MI0035166

Description

Oreochromis niloticus oni-mir-10615b precursor miRNA

Sequence

727 reads, 1.0 reads per million, 73 experiments

UGCACAGCAUUAACGCGUUAGCguaguuagcuuguUAACGCAUUAGCGCUGUCCAGC
((.(((((.((((.(((((((((.((....))))))))))).)))).))))).))..

Structure

--  C     A    C         u  u 
  UG ACAGC UUAA GCGUUAGCg ag u
  || ||||| |||| ||||||||| ||  
  AC UGUCG GAUU CGCAAUugu uc a
CG  C     C    A         -  g 

Annotation confidence High

Genome context

CM001450.1: 31312536-31312592 [-]

Mature oni-miR-10615b-5p

• Accession: MIMAT0043144
• Description: Oreochromis niloticus oni-miR-10615b-5p mature miRNA
• Sequence: 1 - UGCACAGCAUUAACGCGUUAGC - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10615b-3p

• Accession: MIMAT0059600
• Description: Oreochromis niloticus oni-miR-10615b-3p mature miRNA
• Sequence: 36 - UAACGCAUUAGCGCUGUCCAGC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774