Stem-loop oni-mir-10655

Accession

MI0035171

Description

Oreochromis niloticus oni-mir-10655 precursor miRNA

Sequence

582 reads, 1.0 reads per million, 89 experiments

UUGCAGUGCACGGAGAGGAUUGAguguuucugauUUCCACCUCUGUGUCCUCUGCAGU
((((((.((((((((.(((.(.((.....)).)..)))..))))))))...)))))).

Structure

-      --U        -A   -U G  u 
 UUGCAG   GCACGGAG  GGA  U Ag g
 ||||||   ||||||||  |||  | || u
 GACGUC   UGUGUCUC  CCU  a uc u
U      UCC        CA   Uu g  u 

Annotation confidence Medium

Genome context

GL831181.1: 2626887-2626944 [+]

Mature oni-miR-10655-5p

• Accession: MIMAT0059604
• Description: Oreochromis niloticus oni-miR-10655-5p mature miRNA
• Sequence: 1 - UUGCAGUGCACGGAGAGGAUUGA - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10655-3p

• Accession: MIMAT0043149
• Description: Oreochromis niloticus oni-miR-10655-3p mature miRNA
• Sequence: 35 - UUCCACCUCUGUGUCCUCUGCAGU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774