Stem-loop oni-mir-10657

Accession

MI0035173

Description

Oreochromis niloticus oni-mir-10657 precursor miRNA

Sequence

402 reads, 1.0 reads per million, 27 experiments

CACGGGCGGCAGAGAUUGACAgucacggauagagcauccugCCAACUUCUCCGUCAGCCGUGCCa
(((((..(((.((((......(.((.((((.....))))))).....)))).)))..)))))...

Structure

---     GC   A    UUGACA u  c    a 
   CACGG  GGC GAGA      g ca ggau g
   |||||  ||| ||||      | || |||| a
   GUGCC  CUG CUCU      C gu ccua g
aCC     GA   C    -UCAAC -  -    c 

Annotation confidence High

Genome context

CM001453.1: 8047004-8047068 [+]

Mature oni-miR-10657-5p

• Accession: MIMAT0043151
• Description: Oreochromis niloticus oni-miR-10657-5p mature miRNA
• Sequence: 1 - CACGGGCGGCAGAGAUUGACA - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10657-3p

• Accession: MIMAT0059606
• Description: Oreochromis niloticus oni-miR-10657-3p mature miRNA
• Sequence: 42 - CCAACUUCUCCGUCAGCCGUGCC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774