Stem-loop oni-mir-10658

Accession

MI0035174

Description

Oreochromis niloticus oni-mir-10658 precursor miRNA

Sequence

687 reads, 1.0 reads per million, 69 experiments

AUGAGAAUGCUGACAGGGAGCUauggcuuuagcaaugcUGCCUGUCACUCUUCUGUCU
...((((...(((((((.(((....((....))...))).)))))))...))))....

Structure

-AUG    UGC       G   Uaug  u 
    AGAA   UGACAGG AGC    gc u
    ||||   ||||||| |||    ||  
    UCUU   ACUGUCC Ucg    cg u
UCUG    CUC       G   -uaa  a 

Annotation confidence High

Genome context

CM001456.1: 31819359-31819416 [+]

Mature oni-miR-10658-5p

• Accession: MIMAT0043152
• Description: Oreochromis niloticus oni-miR-10658-5p mature miRNA
• Sequence: 1 - AUGAGAAUGCUGACAGGGAGCU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10658-3p

• Accession: MIMAT0059607
• Description: Oreochromis niloticus oni-miR-10658-3p mature miRNA
• Sequence: 39 - UGCCUGUCACUCUUCUGUCU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774