Stem-loop oni-mir-10661

Accession

MI0035177

Description

Oreochromis niloticus oni-mir-10661 precursor miRNA

Sequence

544 reads, 1.0 reads per million, 61 experiments

AACACGCGGCCCGGCAGCUCUgaguucacuggguauuugaGAUUCCGGGCCAGCGUUGUGUU
.(((((((((((((...(((.((((((....)).)))))))...))))))).))).)))...

Structure

--A   -   -       CAG   U    -  a 
   ACA CGC GGCCCGG   CUC gagu uc c
   ||| ||| |||||||   ||| |||| ||  
   UGU GCG CCGGGCC   Gag uuua gg u
UUG   U   A       UUA   -    u  g 

Annotation confidence High

Genome context

CM001452.1: 4567054-4567115 [+]

Mature oni-miR-10661-5p

• Accession: MIMAT0043155
• Description: Oreochromis niloticus oni-miR-10661-5p mature miRNA
• Sequence: 1 - AACACGCGGCCCGGCAGCUCU - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10661-3p

• Accession: MIMAT0059610
• Description: Oreochromis niloticus oni-miR-10661-3p mature miRNA
• Sequence: 41 - GAUUCCGGGCCAGCGUUGUGUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774