miRBase entry: oni-mir-10662

Stem-loop oni-mir-10662

Accession

MI0035178

Description

Oreochromis niloticus oni-mir-10662 precursor miRNA

Sequence

AAGUAGAAUAAAUCAUUUUCUGUgaucaaacugacagaucaaugauuuagucucuuug
(((.(((.(((((((((.(((((.(......).)))))..))))))))).))))))..

Structure

--   U   A         -U     g uc 
  AAG AGA UAAAUCAUU  UCUGU a  a
  ||| ||| |||||||||  ||||| |   
  uuc ucu auuuaguaa  agaca u  a
gu   -   g         cu     g ca

Annotation confidence Not enough data

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Genome context

CM001444.1: 27574335-27574392 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10662

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-10662

Accession	MIMAT0043156
Description	Oreochromis niloticus oni-miR-10662 mature miRNA
Sequence	1 - AAGUAGAAUAAAUCAUUUUCUGU - 23
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774