miRBase entry: oni-mir-10666

Stem-loop oni-mir-10666

Accession

MI0035183

Description

Oreochromis niloticus oni-mir-10666 precursor miRNA

Sequence

AAACGGAGCAUGAUUCAAACUCauuguggaugaguguguuuguuuccugcgcgccug
....((.(((.((..(((((.((((.......)))).)))))..)).)))...))..

Structure

AAAC  --A   U  UU     U    gu 
    GG   GCA GA  CAAAC Cauu  g
    ||   ||| ||  ||||| ||||  g
    cc   cgu cu  guuug guga  a
--gu  gcg   c  uu     u    gu

Annotation confidence Not enough data

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Genome context

CM001457.1: 29353546-29353602 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10666

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-10666

Accession	MIMAT0043161
Description	Oreochromis niloticus oni-miR-10666 mature miRNA
Sequence	1 - AAACGGAGCAUGAUUCAAACUC - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774