Stem-loop oni-mir-10667-1

Accession

MI0035184

Description

Oreochromis niloticus oni-mir-10667-1 precursor miRNA

Sequence

2599 reads, 5.0 reads per million, 57 experiments

CACACGAGCCGCAAUCCUCAUUuauugugcaauaaaUGAGGAUUGCGGCUCGUGUGCA
((((((((((((((((((((((((((....))))))))))))))))))))))))))..

Structure

--                          g 
  CACACGAGCCGCAAUCCUCAUUuauu u
  ||||||||||||||||||||||||||  
  GUGUGCUCGGCGUUAGGAGUaaauaa g
AC                          c 

Annotation confidence High

Genome context

GL831239.1: 1403090-1403147 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10667-1

Mature oni-miR-10667-5p

• Accession: MIMAT0059616
• Description: Oreochromis niloticus oni-miR-10667-5p mature miRNA
• Sequence: 1 - CACACGAGCCGCAAUCCUCAUU - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10667-3p

• Accession: MIMAT0043162
• Description: Oreochromis niloticus oni-miR-10667-3p mature miRNA
• Sequence: 37 - UGAGGAUUGCGGCUCGUGUGCA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774