Stem-loop oni-mir-10670

Accession

MI0035188

Description

Oreochromis niloticus oni-mir-10670 precursor miRNA

Sequence

750 reads, 1.0 reads per million, 89 experiments

AAAAGGGCAUUAACCUAAGCACUaacaaguuauacucaagggUGCGUAGUUAGUUCCCUUUUUa
(((((((.((((((.((.(((((....(((...)))....))))).)))))))).)))))))..

Structure

--       C      C  A     aaca   u 
  AAAAGGG AUUAAC UA GCACU    agu  
  ||||||| |||||| || |||||    ||| a
  UUUUCCC UGAUUG AU CGUgg    uca  
aU       U      -  G     gaac   u 

Annotation confidence High

Genome context

CM001448.1: 16790423-16790486 [+]

Mature oni-miR-10670-5p

• Accession: MIMAT0043165
• Description: Oreochromis niloticus oni-miR-10670-5p mature miRNA
• Sequence: 1 - AAAAGGGCAUUAACCUAAGCACU - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10670-3p

• Accession: MIMAT0059619
• Description: Oreochromis niloticus oni-miR-10670-3p mature miRNA
• Sequence: 43 - UGCGUAGUUAGUUCCCUUUUU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774